Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS00255 | Not Available | + | 40427 - 40747 | 11702.0 |
| Hypothetical protein | EJD96_RS00260 | Not Available | + | 40744 - 41457 | 26779.2 |
| 3tm-type holin | EJD96_RS00005 | Not Available | - | 158 - 733 | 19913.1 |
| glycoside hydrolase family 108 protein | EJD96_RS00010 | Not Available | - | 735 - 1217 | 17560.0 |
| phage holin family protein | EJD96_RS00015 | Not Available | - | 1214 - 1540 | 11904.6 |
| hypothetical protein | EJD96_RS00020 | Not Available | - | 1609 - 1974 | 12895.0 |
| lamg domain-containing protein | EJD96_RS00025 | Not Available | - | 1974 - 4034 | 70115.9 |
| phage tail protein | EJD96_RS00030 | Not Available | - | 4036 - 7038 | 105562.0 |
| c40 family peptidase | EJD96_RS00035 | Not Available | - | 7039 - 7458 | 15904.8 |
| duf2163 domain-containing protein | EJD96_RS00040 | Not Available | - | 7455 - 8309 | 30194.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.