Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | EJD96_RS22395 | Not Available | + | 4980227 - 4981183 | 34441.9 |
| tonb-dependent receptor | EJD96_RS22400 | Not Available | - | 4981209 - 4983299 | 77495.5 |
| nad(p)-dependent alcohol dehydrogenase | EJD96_RS22405 | Not Available | - | 4983778 - 4984827 | 37247.6 |
| duf2442 domain-containing protein | EJD96_RS22410 | Not Available | - | 4985143 - 4985595 | 15937.2 |
| hypothetical protein | EJD96_RS22415 | Not Available | - | 4985592 - 4986020 | 16744.1 |
| aldose epimerase family protein | EJD96_RS22420 | Not Available | - | 4986245 - 4987309 | 38926.7 |
| xylr family transcriptional regulator | EJD96_RS22425 | Not Available | - | 4987306 - 4988562 | 46320.5 |
| d-xylose abc transporter substrate-binding protein | EJD96_RS22430 | Not Available | + | 4988953 - 4989969 | 36744.4 |
| d-xylose abc transporter atp-binding protein | EJD96_RS22435 | Not Available | + | 4990072 - 4991628 | 56245.6 |
| sugar abc transporter permease | EJD96_RS22440 | Not Available | + | 4991654 - 4992811 | 40258.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.