Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | EJD96_RS02295 | Not Available | + | 433361 - 434416 | 38591.5 |
| 2-keto-4-pentenoate hydratase | EJD96_RS02300 | Not Available | + | 434596 - 435438 | 30937.0 |
| yaii/yqxd family protein | EJD96_RS02305 | Not Available | + | 435458 - 435913 | 16267.6 |
| duf2147 domain-containing protein | EJD96_RS02310 | Not Available | - | 435925 - 436389 | 16698.2 |
| valine--trna ligase | EJD96_RS02315 | Not Available | - | 436546 - 439356 | 105479.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EJD96_RS02320 | Not Available | + | 439528 - 439779 | 9548.15 |
| type ii toxin-antitoxin system vapc family toxin | EJD96_RS02325 | Not Available | + | 439776 - 440189 | 15388.6 |
| hypothetical protein | EJD96_RS02330 | Not Available | - | 440250 - 441089 | 29980.0 |
| hypothetical protein | EJD96_RS02335 | Not Available | - | 441089 - 442708 | 59557.9 |
| ompa family protein | EJD96_RS02340 | Not Available | - | 442745 - 444496 | 61355.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.