Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (gtp) | EJD96_RS21400 | Not Available | - | 4757967 - 4759835 | 68126.3 |
| hypothetical protein | EJD96_RS21405 | Not Available | + | 4759848 - 4760276 | 15844.8 |
| d-2-hydroxyacid dehydrogenase family protein | EJD96_RS21410 | Not Available | + | 4760485 - 4761471 | 35438.9 |
| l-asparaginase | EJD96_RS21415 | Not Available | - | 4761449 - 4762213 | 29103.8 |
| chemotaxis protein chew | EJD96_RS21420 | Not Available | + | 4762557 - 4765196 | 96863.0 |
| asparaginase domain-containing protein | EJD96_RS21425 | Not Available | + | 4765287 - 4765772 | 17179.8 |
| lysr family transcriptional regulator | EJD96_RS21430 | Not Available | - | 4765792 - 4766694 | 32761.6 |
| yeih family protein | EJD96_RS21435 | Not Available | + | 4766828 - 4767877 | 36556.7 |
| srpbcc family protein | EJD96_RS21440 | Not Available | - | 4767950 - 4768420 | 18254.7 |
| uvrd-helicase domain-containing protein | EJD96_RS21445 | Not Available | + | 4768553 - 4770625 | 78090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.