Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis acyltransferase | EJD96_RS21300 | Not Available | + | 4737781 - 4738665 | 33493.3 |
| diaminopimelate epimerase | EJD96_RS21305 | Not Available | + | 4738701 - 4739564 | 30987.0 |
| tetratricopeptide repeat protein | EJD96_RS21310 | Not Available | - | 4739647 - 4741245 | 58862.2 |
| porin | EJD96_RS21315 | Not Available | + | 4741613 - 4742839 | 41762.7 |
| duf484 family protein | EJD96_RS21320 | Not Available | + | 4743050 - 4743718 | 24701.6 |
| tyrosine recombinase xerc | EJD96_RS21325 | Not Available | + | 4743759 - 4744751 | 36276.5 |
| fur family transcriptional regulator | EJD96_RS21330 | Not Available | + | 4744862 - 4745431 | 20412.9 |
| had-ia family hydrolase | EJD96_RS21335 | Not Available | - | 4745445 - 4746182 | 28047.4 |
| trab/gumn family protein | EJD96_RS21340 | Not Available | + | 4746262 - 4747173 | 33407.1 |
| acetylglutamate kinase | EJD96_RS21345 | Not Available | - | 4747244 - 4748137 | 31818.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.