Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein mind | EJD96_RS21200 | Not Available | + | 4714778 - 4715593 | 29592.6 |
| cell division topological specificity factor mine | EJD96_RS21205 | Not Available | + | 4715595 - 4715864 | 9811.91 |
| response regulator transcription factor | EJD96_RS21210 | Not Available | + | 4715992 - 4716693 | 26072.8 |
| glutamyl-trna reductase | EJD96_RS21215 | Not Available | + | 4716897 - 4718189 | 46750.3 |
| peptide chain release factor 1 | EJD96_RS21220 | Not Available | + | 4718296 - 4719375 | 40138.6 |
| disulfide bond formation protein b | EJD96_RS21225 | Not Available | + | 4719540 - 4720034 | 17854.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | EJD96_RS21230 | Not Available | + | 4720034 - 4720867 | 29750.7 |
| indolepyruvate ferredoxin oxidoreductase family protein | EJD96_RS21235 | Not Available | - | 4720882 - 4724481 | 131897.0 |
| phenylalanine 4-monooxygenase | EJD96_RS21240 | Not Available | - | 4725097 - 4725978 | 33509.6 |
| gnat family n-acetyltransferase | EJD96_RS21245 | Not Available | - | 4726059 - 4726784 | 26949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.