Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | EJD96_RS20950 | Not Available | + | 4650625 - 4651635 | 37467.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | EJD96_RS20955 | Not Available | + | 4651628 - 4652758 | 42659.7 |
| sugar transferase | EJD96_RS20960 | Not Available | + | 4652869 - 4653429 | 21035.9 |
| polysaccharide biosynthesis protein | EJD96_RS20965 | Not Available | + | 4653480 - 4655426 | 70428.5 |
| flagellar motor protein motb | EJD96_RS20970 | Not Available | - | 4655524 - 4656270 | 25576.5 |
| hypothetical protein | EJD96_RS20975 | Not Available | - | 4656267 - 4656956 | 24593.0 |
| malate dehydrogenase (quinone) | EJD96_RS20980 | Not Available | - | 4657185 - 4658834 | 60113.1 |
| chemoreceptor glutamine deamidase ched | EJD96_RS20985 | Not Available | + | 4659345 - 4659956 | 22269.9 |
| 2-oxo-tetronate isomerase | EJD96_RS20990 | Not Available | - | 4660047 - 4660850 | 29252.9 |
| mfs transporter | EJD96_RS20995 | Not Available | - | 4660979 - 4662292 | 47343.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.