Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | EJD96_RS20700 | Not Available | - | 4596386 - 4597330 | 35178.6 |
| comf family protein | EJD96_RS20705 | Not Available | + | 4597454 - 4598362 | 32250.5 |
| trna (cytidine(34)-2'-o)-methyltransferase | EJD96_RS20710 | Not Available | + | 4598399 - 4598881 | 18100.5 |
| abc transporter atp-binding protein | EJD96_RS20715 | Not Available | - | 4599147 - 4599941 | 28767.1 |
| abc transporter permease | EJD96_RS20720 | Not Available | - | 4599943 - 4600836 | 31252.8 |
| abc transporter substrate-binding protein | EJD96_RS20725 | Not Available | - | 4600968 - 4601939 | 33605.8 |
| abc transporter substrate-binding protein | EJD96_RS20730 | Not Available | - | 4602073 - 4603053 | 33972.9 |
| duf2946 family protein | EJD96_RS20735 | Not Available | + | 4603288 - 4603668 | 13062.0 |
| copper chaperone pcu(a)c | EJD96_RS20740 | Not Available | + | 4603758 - 4604291 | 18652.7 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | EJD96_RS20745 | Not Available | - | 4604389 - 4604871 | 17288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.