Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EJD96_RS02145 | Not Available | - | 405380 - 406417 | 38126.1 |
| methyl-accepting chemotaxis protein | EJD96_RS02150 | Not Available | + | 406699 - 408402 | 59592.9 |
| hypothetical protein | EJD96_RS02155 | Not Available | + | 408410 - 408733 | 11981.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EJD96_RS02160 | Not Available | + | 408809 - 410191 | 48987.7 |
| yqia/ycfp family alpha/beta fold hydrolase | EJD96_RS02165 | Not Available | + | 410188 - 410778 | 21647.9 |
| chorismate--pyruvate lyase family protein | EJD96_RS02170 | Not Available | + | 410778 - 411383 | 22023.1 |
| ribonuclease catalytic domain-containing protein | EJD96_RS02175 | Not Available | + | 411400 - 413454 | 75092.8 |
| tonb c-terminal domain-containing protein | EJD96_RS02180 | Not Available | + | 413522 - 414403 | 32393.7 |
| shikimate dehydrogenase | EJD96_RS02185 | Not Available | + | 414499 - 415314 | 29074.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EJD96_RS02190 | Not Available | + | 415341 - 416048 | 27165.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.