Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate--coa ligase paak | EJD96_RS20560 | Not Available | + | 4570113 - 4571453 | 49495.3 |
| 3-oxoadipyl-coa thiolase | EJD96_RS20565 | Not Available | + | 4571487 - 4572692 | 41873.8 |
| enoyl-coa hydratase-related protein | EJD96_RS20570 | Not Available | + | 4572692 - 4573480 | 28057.0 |
| class i sam-dependent methyltransferase | EJD96_RS20575 | Not Available | + | 4573728 - 4574627 | 33432.2 |
| ggdef domain-containing protein | EJD96_RS20580 | Not Available | + | 4574829 - 4575944 | 41377.9 |
| dmt family transporter | EJD96_RS20585 | Not Available | - | 4575945 - 4576832 | 31575.7 |
| yfhl family 4fe-4s dicluster ferredoxin | EJD96_RS20590 | Not Available | - | 4576910 - 4577170 | 9932.8 |
| pantetheine-phosphate adenylyltransferase | EJD96_RS20595 | Not Available | - | 4577215 - 4577697 | 18121.8 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | EJD96_RS20600 | Not Available | - | 4577734 - 4578408 | 24218.1 |
| m16 family metallopeptidase | EJD96_RS20605 | Not Available | - | 4578455 - 4579771 | 46840.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.