Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EJD96_RS20510 | Not Available | - | 4561755 - 4562375 | 23299.4 |
| phenylacetic acid degradation protein paay | EJD96_RS20515 | Not Available | + | 4562681 - 4563283 | 21231.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | EJD96_RS20520 | Not Available | + | 4563402 - 4564388 | 37350.5 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | EJD96_RS20525 | Not Available | + | 4564475 - 4564759 | 10594.6 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | EJD96_RS20530 | Not Available | + | 4564773 - 4565525 | 28303.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | EJD96_RS20535 | Not Available | + | 4565522 - 4566067 | 19732.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paae | EJD96_RS20540 | Not Available | + | 4566131 - 4567201 | 39734.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | EJD96_RS20545 | Not Available | + | 4567263 - 4568054 | 28129.9 |
| 3-hydroxyacyl-coa dehydrogenase | EJD96_RS20550 | Not Available | + | 4568056 - 4569594 | 55545.0 |
| hydroxyphenylacetyl-coa thioesterase paai | EJD96_RS20555 | Not Available | + | 4569587 - 4570063 | 16938.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.