Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase | EJD96_RS20460 | Not Available | + | 4549373 - 4549621 | 8783.42 |
| acetyl-coa carboxylase biotin carboxylase subunit | EJD96_RS20465 | Not Available | + | 4549632 - 4551020 | 49964.7 |
| 5-oxoprolinase subunit b family protein | EJD96_RS20470 | Not Available | + | 4551022 - 4551921 | 33684.2 |
| biotin-dependent carboxyltransferase family protein | EJD96_RS20475 | Not Available | + | 4551911 - 4552888 | 35083.0 |
| purine-cytosine permease family protein | EJD96_RS20480 | Not Available | + | 4553066 - 4554397 | 48373.9 |
| abc transporter atp-binding protein | EJD96_RS20485 | Not Available | - | 4554447 - 4555247 | 28226.3 |
| abc transporter permease subunit | EJD96_RS20490 | Not Available | - | 4555244 - 4557034 | 63153.4 |
| branched-chain amino acid abc transporter permease | EJD96_RS20495 | Not Available | - | 4557045 - 4558097 | 36918.5 |
| phenylacetic acid degradation bifunctional protein paaz | EJD96_RS20500 | Not Available | - | 4558219 - 4560279 | 72904.3 |
| abc transporter substrate-binding protein | EJD96_RS20505 | Not Available | - | 4560537 - 4561682 | 40417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.