Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | EJD96_RS20410 | Not Available | + | 4533180 - 4535303 | 81677.6 |
| site-specific dna-methyltransferase | EJD96_RS20415 | Not Available | + | 4535343 - 4537451 | 79661.0 |
| dna-binding protein | EJD96_RS20420 | Not Available | + | 4537462 - 4538487 | 39170.0 |
| fic family protein | EJD96_RS20425 | Not Available | + | 4538487 - 4538927 | 16554.9 |
| type iii restriction-modification system endonuclease | EJD96_RS20430 | Not Available | + | 4538930 - 4542013 | 115749.0 |
| mfs transporter | EJD96_RS20435 | Not Available | + | 4542429 - 4543715 | 46170.0 |
| tim-barrel domain-containing protein | EJD96_RS20440 | Not Available | + | 4543732 - 4546143 | 91163.8 |
| porin | EJD96_RS20445 | Not Available | + | 4546198 - 4547409 | 41471.4 |
| lysr family transcriptional regulator | EJD96_RS20450 | Not Available | - | 4547537 - 4548454 | 33958.0 |
| 5-oxoprolinase subunit pxpa | EJD96_RS20455 | Not Available | + | 4548584 - 4549342 | 27289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.