Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EJD96_RS20310 | Not Available | - | 4513618 - 4514415 | 28343.8 |
| imidazole glycerol phosphate synthase subunit hish | EJD96_RS20315 | Not Available | - | 4514492 - 4515130 | 23475.9 |
| imidazoleglycerol-phosphate dehydratase hisb | EJD96_RS20320 | Not Available | - | 4515192 - 4515788 | 21754.0 |
| histidinol-phosphate transaminase | EJD96_RS20325 | Not Available | - | 4515862 - 4516980 | 40263.6 |
| dna-methyltransferase | EJD96_RS20330 | Not Available | - | 4516955 - 4517785 | 30919.8 |
| histidinol dehydrogenase | EJD96_RS20335 | Not Available | - | 4517790 - 4519106 | 46686.8 |
| atp phosphoribosyltransferase | EJD96_RS20340 | Not Available | - | 4519151 - 4519801 | 23473.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EJD96_RS20345 | Not Available | - | 4519831 - 4521081 | 44426.2 |
| bola family protein | EJD96_RS20350 | Not Available | - | 4521091 - 4521327 | 8749.62 |
| abc transporter permease | EJD96_RS20355 | Not Available | - | 4521375 - 4522139 | 28039.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.