Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | EJD96_RS20260 | Not Available | + | 4505699 - 4506409 | 25572.5 |
| d-lactate dehydrogenase | EJD96_RS20265 | Not Available | - | 4506429 - 4508192 | 65282.3 |
| mfs transporter | EJD96_RS20270 | Not Available | - | 4508238 - 4509575 | 47585.4 |
| twin-arginine translocase subunit tatc | EJD96_RS20275 | Not Available | - | 4509849 - 4510619 | 27700.0 |
| sec-independent protein translocase protein tatb | EJD96_RS20280 | Not Available | - | 4510671 - 4511192 | 18740.5 |
| sec-independent protein translocase subunit tata | EJD96_RS20285 | Not Available | - | 4511313 - 4511516 | 7238.9 |
| histidine triad nucleotide-binding protein | EJD96_RS20290 | Not Available | - | 4511590 - 4511970 | 13635.5 |
| phosphoribosyl-atp diphosphatase | EJD96_RS20295 | Not Available | - | 4512020 - 4512358 | 12372.8 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS20300 | Not Available | - | 4512472 - 4512855 | 14585.4 |
| imidazole glycerol phosphate synthase subunit hisf | EJD96_RS20305 | Not Available | - | 4512852 - 4513616 | 26798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.