Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | + | 4497968 - 4498043 | Not Available |
| clpxp protease specificity-enhancing factor | EJD96_RS20215 | Not Available | - | 4498068 - 4498565 | 18000.1 |
| glutathione s-transferase n-terminal domain-containing protein | EJD96_RS20220 | Not Available | - | 4498698 - 4499309 | 23822.1 |
| cytochrome c1 | EJD96_RS20225 | Not Available | - | 4499408 - 4500172 | 28489.3 |
| cytochrome b | EJD96_RS20230 | Not Available | - | 4500196 - 4501602 | 52541.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EJD96_RS20235 | Not Available | - | 4501605 - 4502213 | 21776.8 |
| large conductance mechanosensitive channel protein mscl | EJD96_RS20240 | Not Available | + | 4502506 - 4502943 | 15638.5 |
| nif3-like dinuclear metal center hexameric protein | EJD96_RS20245 | Not Available | - | 4502962 - 4503726 | 27831.2 |
| do family serine endopeptidase | EJD96_RS20250 | Not Available | + | 4503770 - 4504951 | 41766.9 |
| duf2461 domain-containing protein | EJD96_RS20255 | Not Available | + | 4504970 - 4505665 | 26476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.