Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | EJD96_RS20160 | Not Available | - | 4484640 - 4485557 | 33103.8 |
| abc transporter permease | EJD96_RS20165 | Not Available | - | 4485588 - 4486538 | 32778.3 |
| abc transporter permease | EJD96_RS20170 | Not Available | - | 4486535 - 4487473 | 32469.3 |
| atp-binding cassette domain-containing protein | EJD96_RS20175 | Not Available | - | 4487512 - 4489020 | 55317.4 |
| substrate-binding domain-containing protein | EJD96_RS20180 | Not Available | - | 4489116 - 4490111 | 34854.8 |
| methyl-accepting chemotaxis protein | EJD96_RS24440 | Not Available | + | 4490679 - 4492304 | 57679.6 |
| sensor domain-containing diguanylate cyclase | EJD96_RS20190 | Not Available | + | 4492767 - 4494335 | 58718.8 |
| sdr family oxidoreductase | EJD96_RS20195 | Not Available | - | 4494871 - 4495737 | 31386.3 |
| nadp-dependent oxidoreductase | EJD96_RS20200 | Not Available | - | 4495774 - 4496706 | 32275.8 |
| lysr family transcriptional regulator | EJD96_RS20205 | Not Available | + | 4496807 - 4497682 | 31826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.