Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EJD96_RS20110 | Not Available | + | 4472930 - 4473349 | 16004.1 |
| abc transporter substrate-binding protein | EJD96_RS20115 | Not Available | + | 4473616 - 4474761 | 40094.6 |
| branched-chain amino acid abc transporter permease | EJD96_RS20120 | Not Available | + | 4474851 - 4475891 | 36286.4 |
| abc transporter permease subunit | EJD96_RS20125 | Not Available | + | 4475888 - 4477681 | 64233.9 |
| abc transporter atp-binding protein | EJD96_RS20130 | Not Available | + | 4477678 - 4478433 | 27337.6 |
| acyl-coa dehydrogenase | EJD96_RS20135 | Not Available | + | 4478497 - 4480272 | 63902.7 |
| marr family winged helix-turn-helix transcriptional regulator | EJD96_RS20140 | Not Available | + | 4480250 - 4480735 | 18151.3 |
| hypothetical protein | EJD96_RS20145 | Not Available | - | 4480788 - 4481006 | 7626.07 |
| methyl-accepting chemotaxis protein | EJD96_RS20150 | Not Available | + | 4481280 - 4482803 | 53032.4 |
| porin | EJD96_RS20155 | Not Available | + | 4483420 - 4484592 | 40316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.