Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit b | EJD96_RS20060 | Not Available | - | 4462229 - 4462870 | 22538.1 |
| 3-oxoacid coa-transferase subunit a | EJD96_RS20065 | Not Available | - | 4462867 - 4463541 | 24043.0 |
| iclr family transcriptional regulator c-terminal domain-containing protein | EJD96_RS20070 | Not Available | + | 4463848 - 4464753 | 32410.3 |
| porin | EJD96_RS20075 | Not Available | - | 4464908 - 4466005 | 37888.9 |
| abc transporter substrate-binding protein | EJD96_RS20080 | Not Available | + | 4466562 - 4467737 | 41885.0 |
| hypothetical protein | EJD96_RS20085 | Not Available | + | 4467770 - 4467973 | 7994.89 |
| crotonase/enoyl-coa hydratase family protein | EJD96_RS20090 | Not Available | + | 4468074 - 4468853 | 27945.8 |
| feruloyl-coa synthase | EJD96_RS20095 | Not Available | + | 4468985 - 4470847 | 67978.4 |
| thiolase family protein | EJD96_RS20100 | Not Available | + | 4470861 - 4472114 | 44099.0 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS20105 | Not Available | + | 4472142 - 4472906 | 26380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.