Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pdr/vanb family oxidoreductase | EJD96_RS20010 | Not Available | - | 4451951 - 4452907 | 33993.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | EJD96_RS20015 | Not Available | - | 4452917 - 4453966 | 39244.6 |
| marr family winged helix-turn-helix transcriptional regulator | EJD96_RS20020 | Not Available | + | 4454301 - 4454810 | 18881.7 |
| lysr family transcriptional regulator | EJD96_RS20025 | Not Available | - | 4454756 - 4455727 | 35764.8 |
| hd-gyp domain-containing protein | EJD96_RS20030 | Not Available | + | 4456061 - 4457293 | 45227.3 |
| abc transporter atp-binding protein | EJD96_RS20035 | Not Available | - | 4457341 - 4458042 | 25635.5 |
| abc transporter atp-binding protein | EJD96_RS20040 | Not Available | - | 4458035 - 4458805 | 27882.7 |
| branched-chain amino acid abc transporter permease | EJD96_RS20045 | Not Available | - | 4458802 - 4459818 | 35863.2 |
| branched-chain amino acid abc transporter permease | EJD96_RS20050 | Not Available | - | 4459815 - 4460681 | 30332.4 |
| 3-oxoadipyl-coa thiolase | EJD96_RS20055 | Not Available | - | 4460978 - 4462180 | 41966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.