Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | EJD96_RS19910 | Not Available | + | 4431006 - 4431368 | 13554.3 |
| grx4 family monothiol glutaredoxin | EJD96_RS19915 | Not Available | + | 4431699 - 4432010 | 11272.6 |
| ubix family flavin prenyltransferase | EJD96_RS19920 | Not Available | + | 4432034 - 4432636 | 21859.9 |
| helix-turn-helix domain-containing protein | EJD96_RS19925 | Not Available | + | 4432651 - 4433049 | 14453.3 |
| sdr family oxidoreductase | EJD96_RS19930 | Not Available | - | 4433133 - 4433900 | 27185.8 |
| alpha-ketoglutarate dehydrogenase | EJD96_RS19935 | Not Available | - | 4434054 - 4436735 | 98937.0 |
| lrp/asnc family transcriptional regulator | EJD96_RS19940 | Not Available | + | 4437052 - 4437531 | 17929.0 |
| response regulator | EJD96_RS19945 | Not Available | - | 4437880 - 4438410 | 19240.9 |
| arac family transcriptional regulator | EJD96_RS19950 | Not Available | - | 4438563 - 4439429 | 33047.5 |
| cpbp family intramembrane glutamic endopeptidase | EJD96_RS19955 | Not Available | + | 4439584 - 4440441 | 30824.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.