Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | EJD96_RS19860 | Not Available | + | 4417831 - 4420689 | 105152.0 |
| phytanoyl-coa dioxygenase family protein | EJD96_RS19865 | Not Available | + | 4420860 - 4421627 | 28167.5 |
| methyl-accepting chemotaxis protein | EJD96_RS19870 | Not Available | - | 4421555 - 4423225 | 59695.2 |
| cation:proton antiporter | EJD96_RS19875 | Not Available | - | 4423333 - 4425324 | 71091.4 |
| kpsf/gutq family sugar-phosphate isomerase | EJD96_RS19880 | Not Available | + | 4425682 - 4426710 | 36244.8 |
| kdsc family phosphatase | EJD96_RS19885 | Not Available | + | 4426710 - 4427264 | 19708.7 |
| lps export abc transporter periplasmic protein lptc | EJD96_RS19890 | Not Available | + | 4427261 - 4427869 | 22510.2 |
| lipopolysaccharide transport periplasmic protein lpta | EJD96_RS19895 | Not Available | + | 4427939 - 4428544 | 22051.2 |
| lps export abc transporter atp-binding protein | EJD96_RS19900 | Not Available | + | 4428546 - 4429289 | 27308.1 |
| rna polymerase factor sigma-54 | EJD96_RS19905 | Not Available | + | 4429362 - 4430852 | 55044.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.