Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | EJD96_RS19615 | Not Available | - | 4352704 - 4354173 | 52317.7 |
| m61 family metallopeptidase | EJD96_RS19620 | Not Available | - | 4354372 - 4356168 | 66693.8 |
| glutamate synthase subunit beta | EJD96_RS19625 | Not Available | - | 4356395 - 4357858 | 53092.4 |
| glutamate synthase-related protein | EJD96_RS19630 | Not Available | - | 4357965 - 4362641 | 169943.0 |
| transposase | EJD96_RS19635 | Not Available | - | 4362831 - 4363559 | 27566.8 |
| terc family protein | EJD96_RS19640 | Not Available | - | 4363767 - 4364744 | 36523.6 |
| zf-tfiib domain-containing protein | EJD96_RS19645 | Not Available | - | 4364807 - 4365118 | 11511.6 |
| transcriptional activator nhar | EJD96_RS19650 | Not Available | + | 4365284 - 4366195 | 33511.7 |
| lysr substrate-binding domain-containing protein | EJD96_RS19655 | Not Available | - | 4366604 - 4367467 | 31600.4 |
| ybfb/yjij family mfs transporter | EJD96_RS19660 | Not Available | + | 4367566 - 4368804 | 44036.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.