Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hpr(ser) kinase/phosphatase | EJD96_RS19565 | Not Available | + | 4343227 - 4344165 | 34459.0 |
| rnase adapter rapz | EJD96_RS19570 | Not Available | + | 4344243 - 4345145 | 33625.3 |
| a/g-specific adenine glycosylase | EJD96_RS19575 | Not Available | - | 4345098 - 4346234 | 41481.2 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EJD96_RS19580 | Not Available | - | 4346231 - 4347052 | 30452.1 |
| tetratricopeptide repeat protein | EJD96_RS19585 | Not Available | + | 4347250 - 4349052 | 66722.6 |
| lipoprotein insertase outer membrane protein lolb | EJD96_RS19590 | Not Available | + | 4349049 - 4349681 | 22599.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EJD96_RS19595 | Not Available | + | 4349736 - 4350605 | 31326.7 |
| Trna-gln | Not Available | Not Available | + | 4350683 - 4350759 | Not Available |
| ribose-phosphate pyrophosphokinase | EJD96_RS19605 | Not Available | + | 4350887 - 4351837 | 34208.8 |
| 50s ribosomal protein l25/general stress protein ctc | EJD96_RS19610 | Not Available | + | 4351987 - 4352595 | 21656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.