Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EJD96_RS19520 | Not Available | - | 4331787 - 4332521 | 27476.3 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | EJD96_RS19525 | Not Available | - | 4332606 - 4333028 | 15340.0 |
| hit family protein | EJD96_RS19530 | Not Available | - | 4333106 - 4333558 | 16662.1 |
| duf3683 domain-containing protein | EJD96_RS19535 | Not Available | - | 4333562 - 4337563 | 148169.0 |
| hypothetical protein | EJD96_RS24155 | Not Available | + | 4337941 - 4338078 | 4766.94 |
| yqaa family protein | EJD96_RS19540 | Not Available | - | 4338148 - 4338639 | 18301.8 |
| threonine ammonia-lyase, biosynthetic | EJD96_RS19545 | Not Available | + | 4338977 - 4340512 | 56043.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EJD96_RS19550 | Not Available | + | 4340596 - 4341471 | 32473.3 |
| hypothetical protein | EJD96_RS19555 | Not Available | + | 4341878 - 4342420 | 20000.8 |
| pts sugar transporter subunit iia | EJD96_RS19560 | Not Available | + | 4342707 - 4343180 | 17190.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.