Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component i | EJD96_RS19470 | Not Available | + | 4320811 - 4322307 | 55063.6 |
| aminodeoxychorismate/anthranilate synthase component ii | EJD96_RS19475 | Not Available | + | 4322308 - 4322883 | 21003.4 |
| anthranilate phosphoribosyltransferase | EJD96_RS19480 | Not Available | + | 4322910 - 4323947 | 36549.3 |
| indole-3-glycerol phosphate synthase trpc | EJD96_RS19485 | Not Available | + | 4323991 - 4324791 | 29393.4 |
| 3-oxoacyl-acp reductase family protein | EJD96_RS19490 | Not Available | - | 4324876 - 4325649 | 26343.5 |
| lysr family transcriptional regulator | EJD96_RS19495 | Not Available | + | 4325814 - 4326740 | 33134.0 |
| mfs transporter | EJD96_RS19500 | Not Available | - | 4326748 - 4328244 | 52996.6 |
| ubiquinone biosynthesis regulatory protein kinase ubib | EJD96_RS19505 | Not Available | - | 4328326 - 4329900 | 60284.4 |
| scp2 domain-containing protein | EJD96_RS19510 | Not Available | - | 4329901 - 4330509 | 22269.8 |
| tim44 domain-containing protein | EJD96_RS19515 | Not Available | - | 4330705 - 4331658 | 33318.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.