Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | EJD96_RS19375 | Not Available | + | 4302457 - 4303191 | 26835.9 |
| transporter substrate-binding domain-containing protein | EJD96_RS19380 | Not Available | + | 4303250 - 4304056 | 28666.0 |
| uxaa family hydrolase | EJD96_RS19385 | Not Available | + | 4304146 - 4305681 | 54444.9 |
| fumarylacetoacetate hydrolase family protein | EJD96_RS19390 | Not Available | + | 4305857 - 4307032 | 41843.0 |
| sdr family oxidoreductase | EJD96_RS19395 | Not Available | + | 4307049 - 4307813 | 26301.5 |
| smp-30/gluconolactonase/lre family protein | EJD96_RS19400 | Not Available | + | 4307955 - 4308872 | 33444.5 |
| acyloxyacyl hydrolase | EJD96_RS19405 | Not Available | + | 4309042 - 4309596 | 20130.8 |
| hypothetical protein | EJD96_RS19410 | Not Available | + | 4309621 - 4309803 | 6614.11 |
| 5s ribosomal rna | Not Available | Not Available | + | 4310081 - 4310193 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 4310330 - 4312823 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.