Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | EJD96_RS19325 | Not Available | - | 4292515 - 4294620 | 76143.8 |
| helix-turn-helix transcriptional regulator | EJD96_RS19330 | Not Available | + | 4294790 - 4295599 | 29965.8 |
| lyse family translocator | EJD96_RS19335 | Not Available | - | 4295604 - 4296227 | 21783.2 |
| duf1304 domain-containing protein | EJD96_RS19340 | Not Available | + | 4296451 - 4296801 | 12514.8 |
| duf4088 domain-containing protein | EJD96_RS19345 | Not Available | + | 4296934 - 4297653 | 27158.6 |
| duf3047 domain-containing protein | EJD96_RS19350 | Not Available | - | 4297769 - 4298632 | 31552.7 |
| lysr family transcriptional regulator | EJD96_RS19355 | Not Available | - | 4298787 - 4299761 | 35858.8 |
| arad1 family protein | EJD96_RS19360 | Not Available | + | 4299974 - 4300969 | 36446.5 |
| amino acid abc transporter permease | EJD96_RS19365 | Not Available | + | 4301130 - 4301813 | 24953.9 |
| amino acid abc transporter permease | EJD96_RS19370 | Not Available | + | 4301823 - 4302473 | 23528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.