Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EJD96_RS19230 | Not Available | - | 4275038 - 4275733 | 26106.7 |
| amino acid abc transporter permease | EJD96_RS19235 | Not Available | - | 4275737 - 4276486 | 27359.9 |
| amino acid abc transporter substrate-binding protein | EJD96_RS19240 | Not Available | - | 4276680 - 4277627 | 33912.0 |
| glu/leu/phe/val family dehydrogenase | EJD96_RS19245 | Not Available | - | 4278488 - 4279780 | 46425.6 |
| lysr family transcriptional regulator | EJD96_RS19250 | Not Available | - | 4280117 - 4281112 | 37159.5 |
| abcb family abc transporter atp-binding protein/permease | EJD96_RS19255 | Not Available | - | 4281188 - 4283092 | 70419.2 |
| acyl-coa thioesterase | EJD96_RS19260 | Not Available | + | 4283243 - 4283677 | 15611.8 |
| 2-hydroxyacid dehydrogenase | EJD96_RS19265 | Not Available | + | 4283800 - 4284750 | 33740.9 |
| t6ss immunity protein tdi1 domain-containing protein | EJD96_RS24330 | Not Available | - | 4284892 - 4285257 | 13770.3 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS24335 | Not Available | - | 4285306 - 4285497 | 7506.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.