Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bactofilin family protein | EJD96_RS19180 | Not Available | - | 4267840 - 4268235 | 13780.6 |
| duf6776 family protein | EJD96_RS19185 | Not Available | - | 4268245 - 4268955 | 25834.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EJD96_RS19190 | Not Available | - | 4268979 - 4270016 | 37301.1 |
| 30s ribosomal protein s9 | EJD96_RS19195 | Not Available | - | 4270274 - 4270666 | 14178.1 |
| 50s ribosomal protein l13 | EJD96_RS19200 | Not Available | - | 4270676 - 4271104 | 15815.3 |
| hypothetical protein | EJD96_RS19205 | Not Available | + | 4271103 - 4271426 | 11819.7 |
| osmc family protein | EJD96_RS19210 | Not Available | + | 4271737 - 4272195 | 16476.7 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | EJD96_RS19215 | Not Available | - | 4272260 - 4272886 | 22934.5 |
| dihydroorotase | EJD96_RS19220 | Not Available | - | 4272972 - 4274006 | 37887.6 |
| amino acid abc transporter atp-binding protein | EJD96_RS19225 | Not Available | - | 4274237 - 4274965 | 26593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.