Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | EJD96_RS19130 | Not Available | + | 4256358 - 4257215 | 30739.4 |
| lysr family transcriptional regulator | EJD96_RS19135 | Not Available | - | 4257232 - 4258155 | 33686.7 |
| zip family metal transporter | EJD96_RS19140 | Not Available | - | 4258430 - 4259188 | 27166.6 |
| chemotaxis protein chea | EJD96_RS19145 | Not Available | - | 4259263 - 4261485 | 78948.3 |
| methyl-accepting chemotaxis protein | EJD96_RS19150 | Not Available | - | 4261514 - 4263721 | 80195.4 |
| chemotaxis protein chew | EJD96_RS19155 | Not Available | - | 4263808 - 4264392 | 20604.8 |
| rubredoxin | EJD96_RS19160 | Not Available | - | 4264874 - 4265026 | 5617.63 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EJD96_RS19165 | Not Available | + | 4265122 - 4265970 | 30069.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | EJD96_RS19170 | Not Available | + | 4266001 - 4267284 | 45131.9 |
| iron-sulfur cluster insertion protein erpa | EJD96_RS19175 | Not Available | - | 4267403 - 4267768 | 13035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.