Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glce | EJD96_RS19080 | Not Available | - | 4244237 - 4245316 | 38209.7 |
| fad-linked oxidase c-terminal domain-containing protein | EJD96_RS19085 | Not Available | - | 4245319 - 4246806 | 53190.4 |
| lysr substrate-binding domain-containing protein | EJD96_RS19090 | Not Available | - | 4247057 - 4247947 | 33662.7 |
| fad-binding oxidoreductase | EJD96_RS19095 | Not Available | - | 4248189 - 4249604 | 50990.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EJD96_RS19100 | Not Available | + | 4249909 - 4250463 | 19963.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EJD96_RS19105 | Not Available | - | 4250595 - 4252460 | 66638.3 |
| polyprenyl synthetase family protein | EJD96_RS19110 | Not Available | - | 4252548 - 4253495 | 33040.9 |
| exodeoxyribonuclease vii small subunit | EJD96_RS19115 | Not Available | - | 4253492 - 4253770 | 9733.54 |
| aromatic ring-hydroxylating oxygenase subunit alpha | EJD96_RS19120 | Not Available | + | 4254050 - 4255174 | 42945.0 |
| dmt family transporter | EJD96_RS19125 | Not Available | + | 4255390 - 4256307 | 33094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.