Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS19030 | Not Available | - | 4231438 - 4232238 | 28333.5 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS19035 | Not Available | - | 4232249 - 4233019 | 26952.2 |
| trap transporter large permease subunit | EJD96_RS19040 | Not Available | - | 4233136 - 4235019 | 65793.5 |
| trap transporter substrate-binding protein | EJD96_RS19045 | Not Available | - | 4235168 - 4236202 | 38184.8 |
| acetyl-coa acetyltransferase | EJD96_RS19050 | Not Available | + | 4236956 - 4238137 | 41669.9 |
| acyl-coa synthetase | EJD96_RS19055 | Not Available | + | 4238161 - 4239891 | 63601.3 |
| hypothetical protein | EJD96_RS19060 | Not Available | + | 4239888 - 4240457 | 20520.6 |
| ppc domain-containing dna-binding protein | EJD96_RS19065 | Not Available | + | 4240460 - 4240912 | 16197.4 |
| dicarboxylate/amino acid:cation symporter | EJD96_RS19070 | Not Available | - | 4241310 - 4242605 | 46445.1 |
| glycolate oxidase subunit glcf | EJD96_RS19075 | Not Available | - | 4242967 - 4244211 | 45897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.