Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | EJD96_RS18980 | Not Available | - | 4220521 - 4221288 | 26830.9 |
| pyrroline-5-carboxylate reductase | EJD96_RS18985 | Not Available | - | 4221288 - 4222100 | 27864.7 |
| yggs family pyridoxal phosphate-dependent enzyme | EJD96_RS18990 | Not Available | - | 4222148 - 4222849 | 24525.6 |
| type iv pilus twitching motility protein pilt | EJD96_RS18995 | Not Available | + | 4222932 - 4223987 | 37386.7 |
| glutathione peroxidase | EJD96_RS19000 | Not Available | + | 4224036 - 4224521 | 17964.6 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EJD96_RS19005 | Not Available | - | 4224561 - 4225448 | 32277.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS19010 | Not Available | - | 4225445 - 4227685 | 82880.0 |
| ketol-acid reductoisomerase | EJD96_RS19015 | Not Available | - | 4228006 - 4229022 | 36555.8 |
| sigma-54-dependent fis family transcriptional regulator | EJD96_RS19020 | Not Available | - | 4229072 - 4230229 | 42664.2 |
| lysr family transcriptional regulator | EJD96_RS19025 | Not Available | + | 4230420 - 4231328 | 33830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.