Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | EJD96_RS18930 | Not Available | + | 4212247 - 4213194 | 34834.5 |
| duf86 domain-containing protein | EJD96_RS18935 | Not Available | - | 4213235 - 4213609 | 14475.5 |
| nucleotidyltransferase family protein | EJD96_RS18940 | Not Available | - | 4213606 - 4213896 | 10278.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | EJD96_RS18945 | Not Available | - | 4213990 - 4215084 | 39328.0 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | EJD96_RS18950 | Not Available | - | 4215119 - 4215970 | 31138.0 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | EJD96_RS18955 | Not Available | - | 4216023 - 4216907 | 32834.6 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EJD96_RS18960 | Not Available | - | 4217083 - 4218396 | 48033.0 |
| 4-hydroxybenzoate octaprenyltransferase | EJD96_RS18965 | Not Available | + | 4218704 - 4219558 | 31578.4 |
| thiopurine s-methyltransferase | EJD96_RS18970 | Not Available | + | 4219588 - 4220247 | 24795.8 |
| hypothetical protein | EJD96_RS18975 | Not Available | - | 4220258 - 4220485 | 8343.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.