Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| torf family putative porin | EJD96_RS18830 | Not Available | + | 4187806 - 4188654 | 29979.0 |
| hypothetical protein | EJD96_RS18835 | Not Available | + | 4188688 - 4189095 | 15666.0 |
| hypothetical protein | EJD96_RS18840 | Not Available | + | 4189188 - 4189814 | 23379.4 |
| response regulator | EJD96_RS18845 | Not Available | - | 4189833 - 4190543 | 26271.5 |
| sensor histidine kinase | EJD96_RS18850 | Not Available | - | 4190553 - 4193309 | 100297.0 |
| potassium-transporting atpase subunit kdpc | EJD96_RS18855 | Not Available | - | 4193560 - 4194171 | 21486.8 |
| potassium-transporting atpase subunit kdpb | EJD96_RS18860 | Not Available | - | 4194210 - 4196402 | 77173.6 |
| potassium-transporting atpase subunit kdpa | EJD96_RS18865 | Not Available | - | 4196464 - 4198245 | 63164.1 |
| k(+)-transporting atpase subunit f | EJD96_RS18870 | Not Available | - | 4198247 - 4198336 | 3273.24 |
| diguanylate cyclase domain-containing protein | EJD96_RS18875 | Not Available | - | 4198942 - 4201158 | 82776.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.