Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase family protein | EJD96_RS18780 | Not Available | - | 4176709 - 4177581 | 32414.0 |
| shikimate dehydrogenase family protein | EJD96_RS18785 | Not Available | - | 4177578 - 4178423 | 30217.8 |
| 4-hydroxyphenylpyruvate dioxygenase | EJD96_RS18790 | Not Available | - | 4178428 - 4179309 | 32807.2 |
| iclr family transcriptional regulator c-terminal domain-containing protein | EJD96_RS18795 | Not Available | + | 4179439 - 4180221 | 28706.9 |
| iclr family transcriptional regulator c-terminal domain-containing protein | EJD96_RS18800 | Not Available | + | 4180238 - 4181059 | 29741.0 |
| oxygen-insensitive nad(p)h nitroreductase | EJD96_RS18805 | Not Available | - | 4181073 - 4181726 | 23720.4 |
| lysr family transcriptional regulator | EJD96_RS18810 | Not Available | + | 4182054 - 4182959 | 33539.9 |
| dmt family transporter | EJD96_RS18815 | Not Available | - | 4182968 - 4183939 | 33855.1 |
| methyl-accepting chemotaxis protein | EJD96_RS18820 | Not Available | - | 4184209 - 4185807 | 57128.0 |
| enoyl-coa hydratase | EJD96_RS18825 | Not Available | + | 4186916 - 4187719 | 28928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.