Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EJD96_RS18730 | Not Available | - | 4165026 - 4165394 | 13347.4 |
| response regulator | EJD96_RS18735 | Not Available | - | 4165613 - 4166008 | 14412.7 |
| atpase domain-containing protein | EJD96_RS18740 | Not Available | - | 4166011 - 4167483 | 53318.8 |
| hypothetical protein | EJD96_RS18745 | Not Available | + | 4167679 - 4168020 | 12128.7 |
| methyl-accepting chemotaxis protein | EJD96_RS18750 | Not Available | - | 4168118 - 4169668 | 54945.8 |
| sorbitol dehydrogenase family protein | EJD96_RS18755 | Not Available | + | 4170027 - 4170557 | 19276.3 |
| gmc family oxidoreductase | EJD96_RS18760 | Not Available | + | 4170584 - 4172215 | 59174.6 |
| cytochrome c | EJD96_RS18765 | Not Available | + | 4172224 - 4173723 | 53016.3 |
| mfs transporter | EJD96_RS18770 | Not Available | - | 4173809 - 4175206 | 50510.1 |
| porin | EJD96_RS18775 | Not Available | - | 4175283 - 4176425 | 40853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.