Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| siab family protein kinase | EJD96_RS18680 | Not Available | - | 4153766 - 4154329 | 21108.1 |
| pp2c family protein-serine/threonine phosphatase | EJD96_RS18685 | Not Available | - | 4154326 - 4155594 | 46495.7 |
| hypothetical protein | EJD96_RS18690 | Not Available | - | 4155738 - 4156412 | 25443.7 |
| sdr family oxidoreductase | EJD96_RS18695 | Not Available | + | 4156754 - 4157614 | 30559.3 |
| hypothetical protein | EJD96_RS18700 | Not Available | + | 4157668 - 4158063 | 13922.5 |
| response regulator | EJD96_RS18705 | Not Available | + | 4158146 - 4158505 | 13077.0 |
| hypothetical protein | EJD96_RS18710 | Not Available | - | 4158498 - 4160990 | 89605.3 |
| duf3142 domain-containing protein | EJD96_RS18715 | Not Available | - | 4160990 - 4162264 | 46026.4 |
| mfs transporter | EJD96_RS18720 | Not Available | - | 4162388 - 4163698 | 46899.3 |
| response regulator transcription factor | EJD96_RS18725 | Not Available | - | 4164122 - 4164832 | 26422.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.