Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EJD96_RS18630 | Not Available | + | 4139275 - 4140990 | 61196.5 |
| chemotaxis protein | EJD96_RS18635 | Not Available | + | 4141005 - 4141967 | 34791.3 |
| bacteriohemerythrin | EJD96_RS18640 | Not Available | + | 4142268 - 4142744 | 17089.6 |
| atp-binding protein | EJD96_RS18645 | Not Available | + | 4143209 - 4144573 | 49623.9 |
| hd domain-containing phosphohydrolase | EJD96_RS18650 | Not Available | + | 4144570 - 4145916 | 50607.6 |
| chase domain-containing protein | EJD96_RS18655 | Not Available | + | 4146083 - 4150597 | 166672.0 |
| diguanylate cyclase | EJD96_RS18660 | Not Available | + | 4150594 - 4151556 | 35378.6 |
| response regulator transcription factor | EJD96_RS18665 | Not Available | + | 4151963 - 4152550 | 21388.9 |
| ggdef domain-containing protein | EJD96_RS18670 | Not Available | - | 4152612 - 4153334 | 26550.7 |
| duf1987 domain-containing protein | EJD96_RS18675 | Not Available | - | 4153331 - 4153723 | 14605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.