Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maleylacetate reductase | EJD96_RS18580 | Not Available | - | 4127394 - 4128464 | 37494.4 |
| intradiol ring-cleavage dioxygenase | EJD96_RS18585 | Not Available | - | 4128474 - 4129340 | 32710.5 |
| lysr family transcriptional regulator | EJD96_RS18590 | Not Available | + | 4129458 - 4130375 | 34434.5 |
| chalcone isomerase family protein | EJD96_RS18595 | Not Available | + | 4130491 - 4131072 | 21224.8 |
| mfs transporter | EJD96_RS18600 | Not Available | + | 4131069 - 4132316 | 43674.5 |
| cryptochrome/photolyase family protein | EJD96_RS18605 | Not Available | + | 4132313 - 4133872 | 60380.9 |
| response regulator | EJD96_RS18610 | Not Available | + | 4134092 - 4134727 | 22986.6 |
| sensor histidine kinase | EJD96_RS18615 | Not Available | + | 4134754 - 4136424 | 62067.6 |
| hpt domain-containing protein | EJD96_RS18620 | Not Available | + | 4136459 - 4136833 | 13281.4 |
| atp-binding protein | EJD96_RS18625 | Not Available | + | 4136865 - 4139144 | 83424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.