Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | EJD96_RS18430 | Not Available | - | 4094179 - 4095066 | 30987.2 |
| prephenate dehydratase | EJD96_RS18435 | Not Available | - | 4095106 - 4096179 | 39087.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EJD96_RS18440 | Not Available | - | 4096316 - 4097428 | 40390.3 |
| dna gyrase subunit a | EJD96_RS18445 | Not Available | - | 4097489 - 4100134 | 97516.8 |
| outer membrane protein ompa | EJD96_RS18450 | Not Available | + | 4100852 - 4101463 | 21301.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EJD96_RS18455 | Not Available | + | 4101609 - 4102343 | 26657.1 |
| had family hydrolase | EJD96_RS18460 | Not Available | + | 4102421 - 4103077 | 23545.1 |
| duf748 domain-containing protein | EJD96_RS18465 | Not Available | + | 4103288 - 4106674 | 122354.0 |
| Tmrna,resume consensus sequence (at 85): cttaaatgcaaacgacga | Not Available | Not Available | + | 4106827 - 4107207 | Not Available |
| beta-ketoacyl synthase chain length factor | EJD96_RS18475 | Not Available | + | 4107731 - 4108543 | 28392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.