Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | EJD96_RS18380 | Not Available | - | 4083904 - 4084878 | 36076.9 |
| comea family dna-binding protein | EJD96_RS18385 | Not Available | - | 4085094 - 4085465 | 12881.6 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | EJD96_RS18390 | Not Available | - | 4085596 - 4086528 | 33764.8 |
| udp-glucose dehydrogenase family protein | EJD96_RS18395 | Not Available | - | 4086530 - 4087909 | 50187.9 |
| lipopolysaccharide assembly protein lapb | EJD96_RS18400 | Not Available | - | 4087960 - 4089135 | 44346.2 |
| lipopolysaccharide assembly lapa domain-containing protein | EJD96_RS18405 | Not Available | - | 4089152 - 4089478 | 12307.4 |
| integration host factor subunit beta | EJD96_RS18410 | Not Available | - | 4089779 - 4090084 | 11385.9 |
| 30s ribosomal protein s1 | EJD96_RS18415 | Not Available | - | 4090098 - 4091813 | 62304.3 |
| (d)cmp kinase | EJD96_RS18420 | Not Available | - | 4092031 - 4092699 | 24209.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EJD96_RS18425 | Not Available | - | 4092758 - 4094089 | 48013.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.