Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase | EJD96_RS18280 | Not Available | - | 4060591 - 4061493 | 31267.4 |
| porin | EJD96_RS18285 | Not Available | - | 4061618 - 4062745 | 39444.7 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS18290 | Not Available | - | 4062806 - 4063627 | 28923.6 |
| aldose 1-epimerase | EJD96_RS18295 | Not Available | - | 4063643 - 4064527 | 31892.9 |
| hpch/hpai aldolase family protein | EJD96_RS18300 | Not Available | - | 4064527 - 4065411 | 30692.9 |
| l-arabinonate dehydratase | EJD96_RS18305 | Not Available | - | 4065422 - 4067164 | 62369.9 |
| sulfite exporter taue/safe family protein | EJD96_RS18310 | Not Available | - | 4067183 - 4067944 | 26442.8 |
| alpha-glucosidase | EJD96_RS18315 | Not Available | - | 4067944 - 4070031 | 77987.4 |
| solute:sodium symporter family transporter | EJD96_RS18320 | Not Available | - | 4070054 - 4071817 | 64210.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | EJD96_RS18325 | Not Available | - | 4071866 - 4073332 | 51706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.