Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| panacea domain-containing protein | EJD96_RS18180 | Not Available | + | 4040270 - 4040746 | 18110.2 |
| hypothetical protein | EJD96_RS18185 | Not Available | + | 4040730 - 4041215 | 18555.3 |
| riboflavin synthase | EJD96_RS18190 | Not Available | + | 4041340 - 4041960 | 21433.9 |
| alpha/beta hydrolase | EJD96_RS18195 | Not Available | - | 4041987 - 4042862 | 31379.8 |
| abc transporter atp-binding protein | EJD96_RS18200 | Not Available | - | 4042943 - 4043653 | 26086.7 |
| abc transporter atp-binding protein | EJD96_RS18205 | Not Available | - | 4043650 - 4044417 | 27043.8 |
| branched-chain amino acid abc transporter permease | EJD96_RS18210 | Not Available | - | 4044407 - 4045360 | 34293.2 |
| branched-chain amino acid abc transporter permease | EJD96_RS18215 | Not Available | - | 4045369 - 4046283 | 32351.2 |
| abc transporter substrate-binding protein | EJD96_RS18220 | Not Available | - | 4046296 - 4047474 | 41499.9 |
| anthranilate 1,2-dioxygenase ferredoxin subunit andab | EJD96_RS18225 | Not Available | - | 4047590 - 4048672 | 38571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.