Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | EJD96_RS18130 | Not Available | + | 4032388 - 4034340 | 72835.9 |
| response regulator | EJD96_RS18135 | Not Available | + | 4034372 - 4035031 | 23725.9 |
| rna-binding s4 domain-containing protein | EJD96_RS18140 | Not Available | + | 4035092 - 4035313 | 7847.6 |
| duf924 family protein | EJD96_RS18145 | Not Available | + | 4035310 - 4035927 | 23373.6 |
| type iv pilus modification protein pilv | EJD96_RS18150 | Not Available | + | 4036019 - 4036531 | 17464.2 |
| pilw family protein | EJD96_RS18155 | Not Available | + | 4036531 - 4037415 | 31638.5 |
| pilus assembly protein | EJD96_RS18160 | Not Available | + | 4037412 - 4038002 | 20797.9 |
| type iv pilin protein | EJD96_RS18165 | Not Available | + | 4038005 - 4038487 | 17247.5 |
| gsph/fimt family pseudopilin | EJD96_RS18170 | Not Available | + | 4038492 - 4038965 | 17126.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EJD96_RS18175 | Not Available | + | 4039045 - 4040166 | 40158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.