Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| solute carrier family 23 protein | EJD96_RS18030 | Not Available | - | 4009620 - 4010915 | 43903.9 |
| duf2721 domain-containing protein | EJD96_RS18035 | Not Available | + | 4011216 - 4011632 | 15720.9 |
| antibiotic biosynthesis monooxygenase family protein | EJD96_RS18040 | Not Available | + | 4011793 - 4012095 | 11201.4 |
| duf3828 domain-containing protein | EJD96_RS18045 | Not Available | + | 4012258 - 4012833 | 20935.4 |
| hypothetical protein | EJD96_RS18050 | Not Available | + | 4013170 - 4013712 | 19646.5 |
| exodeoxyribonuclease i | EJD96_RS18055 | Not Available | + | 4013856 - 4015292 | 53743.6 |
| duf3861 domain-containing protein | EJD96_RS18060 | Not Available | - | 4015315 - 4015617 | 11340.7 |
| padr family transcriptional regulator | EJD96_RS18065 | Not Available | - | 4015669 - 4016304 | 23649.2 |
| nucleoside 2-deoxyribosyltransferase | EJD96_RS18070 | Not Available | - | 4016592 - 4017086 | 18148.6 |
| acyl-coa dehydrogenase | EJD96_RS18075 | Not Available | - | 4017148 - 4019622 | 89941.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.