Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS17985 | Not Available | - | 4001609 - 4001824 | 7431.48 |
| glycerophosphodiester phosphodiesterase | EJD96_RS17990 | Not Available | - | 4002065 - 4002808 | 26719.9 |
| 2tm domain-containing protein | EJD96_RS17995 | Not Available | + | 4002981 - 4003259 | 10393.8 |
| sensor histidine kinase | EJD96_RS18000 | Not Available | + | 4003306 - 4004448 | 41284.6 |
| lytr/algr family response regulator transcription factor | EJD96_RS18005 | Not Available | + | 4004466 - 4005272 | 30053.5 |
| hypothetical protein | EJD96_RS24145 | Not Available | - | 4005284 - 4005424 | 5018.13 |
| glutamine--trna ligase/yqey domain fusion protein | EJD96_RS18010 | Not Available | + | 4005669 - 4007420 | 66804.8 |
| hypothetical protein | EJD96_RS18015 | Not Available | + | 4007567 - 4007929 | 13464.7 |
| transporter | EJD96_RS18020 | Not Available | - | 4008001 - 4009014 | 38242.2 |
| hypothetical protein | EJD96_RS18025 | Not Available | - | 4009118 - 4009351 | 8459.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.