Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | EJD96_RS17935 | Not Available | - | 3984682 - 3987546 | 102270.0 |
| transcription termination factor nusa | EJD96_RS17940 | Not Available | - | 3987599 - 3989158 | 57910.9 |
| ribosome maturation factor rimp | EJD96_RS17945 | Not Available | - | 3989155 - 3989649 | 18526.1 |
| 23s rrna pseudouridine(2605) synthase rlub | EJD96_RS17950 | Not Available | - | 3990043 - 3992070 | 71417.5 |
| smc-scp complex subunit scpb | EJD96_RS17955 | Not Available | - | 3992057 - 3993106 | 38105.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS17960 | Not Available | - | 3993516 - 3995681 | 81261.8 |
| fmn-binding glutamate synthase family protein | EJD96_RS17965 | Not Available | + | 3995977 - 3997572 | 58382.4 |
| sulfurtransferase tusa family protein | EJD96_RS17970 | Not Available | - | 3997685 - 3997921 | 8840.63 |
| nudix domain-containing protein | EJD96_RS17975 | Not Available | - | 3998082 - 3998636 | 20553.5 |
| alanine--trna ligase | EJD96_RS17980 | Not Available | - | 3998666 - 4001290 | 94300.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.