Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EJD96_RS17885 | Not Available | - | 3972749 - 3974233 | 55481.9 |
| lytic transglycosylase domain-containing protein | EJD96_RS17890 | Not Available | + | 3974699 - 3975682 | 34519.9 |
| pyridoxal phosphate-dependent aminotransferase | EJD96_RS17895 | Not Available | - | 3975827 - 3977008 | 42997.9 |
| transcription antitermination factor nusb | EJD96_RS17900 | Not Available | - | 3977124 - 3977594 | 17396.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | EJD96_RS17905 | Not Available | - | 3977712 - 3978197 | 17217.5 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EJD96_RS17910 | Not Available | - | 3978255 - 3979376 | 40208.5 |
| trna dihydrouridine(20/20a) synthase dusa | EJD96_RS17915 | Not Available | - | 3979452 - 3980474 | 37890.8 |
| translational gtpase typa | EJD96_RS17920 | Not Available | - | 3981045 - 3982886 | 68296.9 |
| trna pseudouridine(55) synthase trub | EJD96_RS17925 | Not Available | - | 3983042 - 3984046 | 35965.5 |
| 30s ribosome-binding factor rbfa | EJD96_RS17930 | Not Available | - | 3984177 - 3984569 | 14465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.